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1.
J Pediatr Ophthalmol Strabismus ; 61(1): 59-66, 2024.
Article in English | MEDLINE | ID: mdl-37092661

ABSTRACT

PURPOSE: To report two new cases with confirmed diagnosis of Heimler syndrome and describe their systemic and ophthalmic phenotype and visual rehabilitation. METHODS: Retrospective review of medical records. RESULTS: Both siblings were diagnosed as having sensori-neural hearing loss and retinal dystrophy with exuberant intraretinal cystoid spaces and cone-rod dysfunction. The older sibling also had amelogenesis imperfecta and neither had nail abnormalities. Genetic analysis identified homozygosity for the pathogenic variant c.2528G>A p.(Gly843Asp) in the PEX1 gene in both siblings. The parents were heterozygous carriers of the variant. CONCLUSIONS: The authors report a familial case of Heimler syndrome due to biallelic PEX1 pathogenic variants that manifested as macular dystrophy characterized by cone-rod dysfunction and complicated by intraretinal cystoid spaces. Review of the literature shows that ocular phenotype is variable in patients with Heimler syndrome. [J Pediatr Ophthalmol Strabismus. 2024;61(1):59-66.].


Subject(s)
Amelogenesis Imperfecta , Eye Abnormalities , Hearing Loss, Sensorineural , Nails, Malformed , Humans , Amelogenesis Imperfecta/diagnosis , Amelogenesis Imperfecta/genetics , Amelogenesis Imperfecta/complications , Mutation , Siblings , Nails, Malformed/diagnosis , Nails, Malformed/genetics , Nails, Malformed/complications , Phenotype , Eye Abnormalities/complications , Pedigree , ATPases Associated with Diverse Cellular Activities/genetics , Membrane Proteins/genetics
2.
Cutis ; 112(4): 200-202, 2023 10.
Article in English | MEDLINE | ID: mdl-37988304

ABSTRACT

FLOTCH (leukonychia totalis-trichilemmal cysts-ciliary dystrophy syndrome) syndrome is a rare genetic cutaneous disorder primarily characterized by multiple recurrent trichilemmal pilar cysts and leukonychia. It may be associated with ciliary dystrophy, koilonychia, and/or less frequently renal calculi and pancreatitis inherited in an autosomal-dominant fashion. We report the case of a 25-year-old Black woman who presented with white-colored fingernails and enlarging cysts in multiple locations including the scalp, rib cage, and forearm and was diagnosed with suspected FLOTCH syndrome. Pilar cysts in unusual locations along with distinct nail changes should prompt clinicians to consider further investigation for conditions such as FLOTCH syndrome.


Subject(s)
Blepharitis , Epidermal Cyst , Hypopigmentation , Nails, Malformed , Female , Humans , Adult , Epidermal Cyst/diagnosis , Blepharitis/complications , Blepharitis/genetics , Hypopigmentation/complications , Nails, Malformed/complications , Nails, Malformed/genetics
5.
Tunis Med ; 101(4): 456-459, 2023 Apr 05.
Article in English | MEDLINE | ID: mdl-38372531

ABSTRACT

INTRODUCTION: Coffin-Siris Syndrome (CSS) is a rare genetic disorder of unknown etiology. It combines digital-ungual abnormalities, facial dysmorphism, developmental and intellectual delay, and other organ-system abnormalities. Oral and dental anomalies are rarer. CASE REPORT: 8-year-old boy with clinical diagnosis of CSS presented facial dysmorphism, sparse hair, a flat and wide nose, absence of nails on 3rd and 5th fingers of the right hand and 3rd and 4th fingers of the left hand, malformation of the feet, toes with nail hypoplasia. Oral and dental anomalies included : bilateral complete cleft lip and palate, delayed eruption of permanent teeth, presence of supernumerary tooth and taurodontism in the first permanent molars. CONCLUSION: Early diagnosis of oral problems and regular follow-up in dentist are necessary to promote good oral health and improve the patient's quality of life.


Subject(s)
Abnormalities, Multiple , Cleft Lip , Cleft Palate , Intellectual Disability , Nails, Malformed , Tooth Abnormalities , Male , Humans , Child , Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/genetics , Cleft Lip/complications , Cleft Lip/diagnosis , Quality of Life , Cleft Palate/complications , Cleft Palate/diagnosis , Tooth Abnormalities/diagnosis , Nails, Malformed/genetics , Intellectual Disability/complications , Intellectual Disability/diagnosis
6.
Genes (Basel) ; 13(11)2022 11 15.
Article in English | MEDLINE | ID: mdl-36421794

ABSTRACT

We report on a cohort of 204 children referred between January 2017 and January 2022 to the German Center for Ectodermal Dysplasias, Erlangen. The most frequent reasons for referral were tooth malformations and lack of multiple teeth leading to the suspicion of an ectodermal dysplasia. Many patients also suffered from being unable to perspire. Nail abnormalities, in contrast, represented a much rarer finding, albeit the impact on some individuals was large. As ectodermal dysplasias are congenital genetic conditions affecting the development and/or homeostasis of two or more ectodermal derivatives, including hair, teeth, nails, and certain glands, we analyzed congenital nail disorders detected in these patients. Dystrophic or otherwise abnormal nails were evident in 17 of 18 subjects with pathogenic WNT10A or GJB6 variants but in none of 161 children with EDA variants underlying X-linked hypohidrotic ectodermal dysplasia. However, 2 of 17 children who carry mutations in EDAR or EDARADD, two other genes involved in the ectodysplasin A signaling pathway, showed nail abnormalities, such as brittle or hypoplastic nails. TP63 variants were regularly associated with nail disorders. In one girl, anonychia congenita caused by a compound heterozygous variant of the R-spondin-4 gene (RSPO4) was diagnosed. Thus, nail dysplasia is rarer among patients with ectodermal dysplasia than commonly thought.


Subject(s)
Ectodermal Dysplasia , Limb Deformities, Congenital , Nails, Malformed , Child , Female , Humans , Nails , Ectodermal Dysplasia/genetics , Nails, Malformed/genetics , Ectoderm
7.
PLoS One ; 17(11): e0277284, 2022.
Article in English | MEDLINE | ID: mdl-36374931

ABSTRACT

Numerous single gene mutations identified in humans and mice result in nail deformities with many similarities between the species. A spontaneous, autosomal, recessive mutation called witch nails (whnl) is described here where the distal nail matrix and nail bed undergo degenerative changes resulting in formation of an abnormal nail plate causing mice to develop long, curved nails. This mutation arose spontaneously in a colony of MRL/MpJ-Faslpr/J at The Jackson Laboratory. Homozygous mutant mice are recognizable by 8 weeks of age by their long, curved nails. The whnl mutation, mapped on Chromosome 15, is due to a 7-bp insertion identified in the 3' region of exon 9 in the Krt90 gene (formerly Riken cDNA 4732456N10Rik), and is predicted to result in a frameshift that changes serine 476 to arginine and subsequently introduces 36 novel amino acids into the protein before a premature stop codon (p. Ser476ArgfsTer36). By immunohistochemistry the normal KRT90 protein is expressed in the nail matrix and nail bed in control mice where lesions are located in mutant mice. Immunoreactivity toward equine KRT124, the ortholog of mouse KRT90, is restricted to the hoof lamellae (equine hoof wall and lamellae are homologous to the mouse nail plate and nail bed) and the mouse nail bed. Equine laminitis lesions are similar to those observed in this mutant mouse suggesting that the latter may be a useful model for hoof and nail diseases. This first spontaneous mouse mutation affecting the novel Krt90 gene provides new insight into the normal regulation of the molecular pathways of nail development.


Subject(s)
Nail Diseases , Nails, Malformed , Animals , Mice , Growth and Development , Horses , Mutation , Nail Diseases/genetics , Nails/chemistry , Nails, Malformed/genetics
8.
Am J Med Genet A ; 188(12): 3563-3566, 2022 12.
Article in English | MEDLINE | ID: mdl-36135319

ABSTRACT

ATP6V1B2 pathogenic variants are linked with variable phenotypes, such as dominant deafness-onychodystrophy syndrome (DDOD), autosomal dominant Zimmermann-Laband syndrome type 2 (ZLS2), and some cases of DOORS (deafness, onychodystrophy, osteodystrophy, intellectual disability [ID], and seizures). Epilepsy was first linked to ATP6V1B2, when the p.(Glu374Gln) missense variant was detected in a patient with ID and seizures, but without characteristic features of DDOD or ZLS2 syndromes. We herein report a novel pathogenic ATP6V1B2:p.Glu374Gly variant detected in an adult patient with ID and myoclonic-atonic seizures. The (re)occurrence of different variants affecting the same highly conserved hydrophilic glutamic acid on position 374 of the V-proton ATPase subunit B, indicates a potential novel pathogenic hotspot and a critical role for the specific residue in the development of epilepsy. ATP6V1B2 gene defects should be considered when analyzing patients with epilepsy, even in the absence of most cardinal features of DDOD, DOORS, or ZLS such as deafness, onychodystrophy, and osteodystrophy.


Subject(s)
Deafness , Epilepsy , Intellectual Disability , Nail Diseases , Nails, Malformed , Vacuolar Proton-Translocating ATPases , Humans , Epilepsy/genetics , Intellectual Disability/genetics , Intellectual Disability/pathology , Nails, Malformed/genetics , Phenotype , Seizures , Syndrome , Vacuolar Proton-Translocating ATPases/genetics
9.
J Int Med Res ; 50(9): 3000605221121955, 2022 Sep.
Article in English | MEDLINE | ID: mdl-36113068

ABSTRACT

The 18q12.3 region contains the SET binding protein 1 (SETBP1) gene. SETBP1 mutations or deletions are associated with Schinzel-Giedion syndrome or intellectual developmental disorder, autosomal dominant 29. We report the prenatal diagnosis and genetic counseling of a patient with a maternally inherited 18q12.3 microdeletion. In this family, the mother and son carried the same microdeletion. Chromosomal microdeletions and microduplications are difficult to detect using conventional cytogenetics, whereas the combination of prenatal ultrasound, karyotype analysis, chromosomal microarray analysis, and genetic counseling is helpful for the prenatal diagnosis of chromosomal microdeletions/microduplications.


Subject(s)
Chromosome Disorders , Hand Deformities, Congenital , Nails, Malformed , Nuclear Proteins , Carrier Proteins/genetics , Chromosome Deletion , Chromosome Disorders/diagnosis , Chromosome Disorders/genetics , Chromosomes, Human, Pair 18 , Chromosomes, Human, Pair 9 , Cytogenetic Analysis , Female , Hand Deformities, Congenital/genetics , Humans , Nails, Malformed/genetics , Nuclear Proteins/genetics , Pregnancy , Prenatal Diagnosis
10.
Eur J Hum Genet ; 30(11): 1292-1296, 2022 11.
Article in English | MEDLINE | ID: mdl-35676340

ABSTRACT

We present the first pachyonychia congenita (PC) to involve all ectodermal derivatives and the first recessive KRT17-related PC in total seven members of two consanguineous Pakistani families. This atypical PC is characterized by an unusual combination of pachyonychia, plantar keratoderma, folliculitis, alopecia, sparse eyebrows, dental anomalies and variable acanthosis nigricans of neck, dry skin, palmoplantar hyperhidrosis, recurrent blisters on soles and/or arms, rough sparse hair on scalp and keratosis pilaris. By exome sequencing we detected homozygous KRT17 c.281G>A (p.(Arg94His)) in affected individuals, and linkage mapping indicated a single locus. Heterozygous variants in KRT17 cause PC2 (PC-K17) with main characteristics of pachyonychia, subungual keratosis, palmoplantar keratoderma, hyperhidrosis, oral leukokeratosis and epidermal cysts, or steatocystoma multiplex, both with dominant inheritance. The causative variant has been reported in heterozygous state in a family afflicted with severe steatocystoma multiplex and in a sporadic PC2 case, and thus we also define a third phenotype related to the variant. Both exome sequencing and linkage mapping demonstrated recessive inheritance whereas Sanger sequencing indicated heterozygosity for the causal variant, reiterating caution for simple targeted sequencing for genetic testing. Testing parents for variants found in sibs could uncover recessive inheritance also in other KRT genes.


Subject(s)
Hyperhidrosis , Nails, Malformed , Pachyonychia Congenita , Steatocystoma Multiplex , Tooth Abnormalities , Humans , Eyebrows , Keratin-17/genetics , Mutation , Nails, Malformed/genetics , Pachyonychia Congenita/genetics , Pedigree
11.
Clin Dermatol ; 40(4): 388-394, 2022.
Article in English | MEDLINE | ID: mdl-35181410

ABSTRACT

Autosomal recessive congenital ichthyosis (ARCI) is a clinically and genetically heterogeneous category of nonsyndromic ichthyosis. Nail changes in ARCI are generally frequent but have been rarely reported and studied in the literature. This stimulated us to conduct a study to describe nail changes in ARCI using a combined literature review and prospective examination from March 2019 to August 2019 (6 months) in the Dermatology Department of Habib Thameur Hospital, Tunis, Tunisia. A total of 25 patients with ARCI had a clinical and dermatoscopic review. The mean age was 19.8 years (range, 1-43), with a female predominance (17 women [68%] and 8 men [32%]). Seventy-two percent had nail unit changes involving more than one nail, none had single nail disease, 64% had involvement of fingernails, and 68% had involvement of toenails, with cases including periungual hyperkeratosis (64%), xanthonychia (40%), pachyonychia (40%), macrolunula (36%), digital clubbing (32%), and onychomycosis (24%). Rarer findings included pseudoainhum, transverse leukonychia, longitudinal melanonychia, and subungual hemorrhages, each in one patient (4%). There was a statistically significant increased frequency of nail changes in adults over children (P = .001). Nail abnormalities statistically associated with ARCI were macrolunula, periungual hyperkeratosis, xanthonychia, and pachyonychia. A comprehensive review of the literature was performed, creating the first comprehensive review addressing nail disease in ARCI.


Subject(s)
Ichthyosis, Lamellar , Ichthyosis , Nail Diseases , Nails, Malformed , Adult , Child , Female , Humans , Ichthyosis/diagnosis , Ichthyosis, Lamellar/diagnosis , Male , Nail Diseases/genetics , Nails , Nails, Malformed/genetics , Prospective Studies , Young Adult
12.
J Assoc Physicians India ; 69(12): 11-12, 2022 Dec.
Article in English | MEDLINE | ID: mdl-35057601

ABSTRACT

Non syndromic Anonychia congenita or congenital absence of finger and toe nails is a rare disorder known to occur due to autosomal recessive inheritance of mutation in the R-spondin-4 gene. We present a case of a 32 year old female born of a non-consanguineous marriage presenting with complete absence of finger and toe nails since birth and similar presentation in family members over four generations, suggesting an autosomal dominant inheritance.


Subject(s)
Nails, Malformed , Adult , Female , Fingers , Humans , Mutation , Nails , Nails, Malformed/congenital , Nails, Malformed/genetics
13.
Hum Genet ; 141(3-4): 821-838, 2022 Apr.
Article in English | MEDLINE | ID: mdl-34232384

ABSTRACT

Deafness and onychodystrophy syndromes are a group of phenotypically overlapping syndromes, which include DDOD syndrome (dominant deafness-onychodystrophy), DOORS syndrome (deafness, onychodystrophy, osteodystrophy, mental retardation and seizures) and Zimmermann-Laband syndrome (gingival hypertrophy, coarse facial features, hypoplasia or aplasia of nails and terminal phalanges, intellectual disability, and hypertrichosis). Pathogenic variants in four genes, ATP6V1B2, TBC1D24, KCNH1 and KCNN3, have been shown to be associated with deafness and onychodystrophy syndromes. ATP6V1B2 encodes a component of the vacuolar H+-ATPase (V-ATPase) and TBC1D24 belongs to GTPase-activating protein, which are all involved in the regulation of membrane trafficking. The overlapping clinical phenotype of TBC1D24- and ATP6V1B2- related diseases and their function with GTPases or ATPases activity indicate that they may have some physiological link. Variants in genes encoding potassium channels KCNH1 or KCNN3, underlying human Zimmermann-Laband syndrome, have only recently been recognized. Although further analysis will be needed, these findings will help to elucidate an understanding of the pathogenesis of these disorders better and will aid in the development of potential therapeutic approaches. In this review, we summarize the latest developments of clinical features and molecular basis that have been reported to be associated with deafness and onychodystrophy disorders and highlight the challenges that may arise in the differential diagnosis.


Subject(s)
Deafness , Hand Deformities, Congenital , Intellectual Disability , Nails, Malformed , Vacuolar Proton-Translocating ATPases , Abnormalities, Multiple , Craniofacial Abnormalities , Deafness/diagnosis , Deafness/genetics , Fibromatosis, Gingival , GTPase-Activating Proteins/genetics , Hand Deformities, Congenital/genetics , Humans , Intellectual Disability/genetics , Nails, Malformed/genetics , Phenotype , Syndrome , Vacuolar Proton-Translocating ATPases/genetics
14.
Pediatr Dermatol ; 38(6): 1586-1587, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34725852

ABSTRACT

Trachyonychia (or twenty-nail dystrophy) is an uncommon chronic disorder manifesting as thin, flattened, brittle nails with excessive longitudinal ridging and loss of luster creating a "sandpaper-like" texture that most commonly presents spontaneously in childhood as an isolated phenomenon; however, it has been historically associated with numerous dermatoses. Rarely, trachyonychia has been reported to occur in families, suggesting a potential hereditary predisposition. We report trachyonychia occurring simultaneously in dizygotic twins, further supporting a possible underlying genetic basis of this idiopathic nail disorder.


Subject(s)
Nail Diseases , Nails, Malformed , Genetic Predisposition to Disease , Humans , Nail Diseases/diagnosis , Nail Diseases/genetics , Nails , Nails, Malformed/diagnosis , Nails, Malformed/genetics , Twins, Dizygotic/genetics
15.
Commun Biol ; 4(1): 1164, 2021 10 07.
Article in English | MEDLINE | ID: mdl-34620975

ABSTRACT

The cellular resting membrane potential (Vm) not only determines electrical responsiveness of excitable cells but also plays pivotal roles in non-excitable cells, mediating membrane transport, cell-cycle progression, and tumorigenesis. Studying these processes requires estimation of Vm, ideally over long periods of time. Here, we introduce two ratiometric genetically encoded Vm indicators, rArc and rASAP, and imaging and analysis procedures for measuring differences in average resting Vm between cell groups. We investigated the influence of ectopic expression of K+ channels and their disease-causing mutations involved in Andersen-Tawil (Kir2.1) and Temple-Baraitser (KV10.1) syndrome on median resting Vm of HEK293T cells. Real-time long-term monitoring of Vm changes allowed to estimate a 40-50 min latency from induction of transcription to functional Kir2.1 channels in HEK293T cells. The presented methodology is readily implemented with standard fluorescence microscopes and offers deeper insights into the role of the resting Vm in health and disease.


Subject(s)
Ectopic Gene Expression/physiology , Membrane Potentials , Potassium Channels, Inwardly Rectifying/genetics , Andersen Syndrome/genetics , HEK293 Cells , Hallux/abnormalities , Humans , Intellectual Disability/genetics , Nails, Malformed/genetics , Potassium Channels, Inwardly Rectifying/metabolism , Thumb/abnormalities
16.
Nat Commun ; 12(1): 4050, 2021 06 30.
Article in English | MEDLINE | ID: mdl-34193871

ABSTRACT

The investigation of genetic forms of juvenile neurodegeneration could shed light on the causative mechanisms of neuronal loss. Schinzel-Giedion syndrome (SGS) is a fatal developmental syndrome caused by mutations in the SETBP1 gene, inducing the accumulation of its protein product. SGS features multi-organ involvement with severe intellectual and physical deficits due, at least in part, to early neurodegeneration. Here we introduce a human SGS model that displays disease-relevant phenotypes. We show that SGS neural progenitors exhibit aberrant proliferation, deregulation of oncogenes and suppressors, unresolved DNA damage, and resistance to apoptosis. Mechanistically, we demonstrate that high SETBP1 levels inhibit P53 function through the stabilization of SET, which in turn hinders P53 acetylation. We find that the inheritance of unresolved DNA damage in SGS neurons triggers the neurodegenerative process that can be alleviated either by PARP-1 inhibition or by NAD + supplementation. These results implicate that neuronal death in SGS originates from developmental alterations mainly in safeguarding cell identity and homeostasis.


Subject(s)
Abnormalities, Multiple/pathology , Carrier Proteins/metabolism , Craniofacial Abnormalities/pathology , DNA Damage , Hand Deformities, Congenital/pathology , Heredodegenerative Disorders, Nervous System/pathology , Intellectual Disability/pathology , Mutation , Nails, Malformed/pathology , Neural Stem Cells/pathology , Nuclear Proteins/metabolism , Tumor Suppressor Protein p53/antagonists & inhibitors , Abnormalities, Multiple/genetics , Abnormalities, Multiple/metabolism , Carrier Proteins/genetics , Cells, Cultured , Craniofacial Abnormalities/genetics , Craniofacial Abnormalities/metabolism , Hand Deformities, Congenital/genetics , Hand Deformities, Congenital/metabolism , Heredodegenerative Disorders, Nervous System/genetics , Heredodegenerative Disorders, Nervous System/metabolism , Humans , Intellectual Disability/genetics , Intellectual Disability/metabolism , Nails, Malformed/genetics , Nails, Malformed/metabolism , Neural Stem Cells/metabolism , Nuclear Proteins/genetics , Organoids
17.
Ophthalmic Genet ; 42(4): 480-485, 2021 08.
Article in English | MEDLINE | ID: mdl-33955814

ABSTRACT

BACKGROUND: Heimler syndrome (OMIM number #234580 and #616617) is a rare condition comprising sensorineural hearing loss (SNHL), nail abnormalities and amelogenesis imperfecta. In addition, patients with this syndrome can have retinal dystrophies. Heimler syndrome is caused by bi-allelic pathogenic variants in the PEX1 or PEX6 gene. Only few patients with this syndrome have been reported. We hereby describe two siblings with genetically confirmed Heimler syndrome and provide imaging of the ocular phenotype. MATERIALS AND METHODS: The medical records of the siblings were reviewed retrospectively. RESULTS: Both brother and sister were diagnosed with SNHL and amelogenesis imperfecta of the permanent teeth; one of the affected siblings also had nail abnormalities. Both patients presented to the ophthalmology department with suboptimal visual acuity, fundus abnormalities and intraretinal cystoid spaces. Full-field electroretinogram revealed a cone-rod dysfunction. A genetic analysis revealed a homozygous likely pathogenic variant c.3077 T > C (p.Leu1026Pro) in the PEX1 gene in both siblings. The parents are heterozygous carriers of the variant. CONCLUSION: We recommend performing regular ophthalmic examination in patients with Heimler syndrome since the ophthalmic manifestations can manifest later in life. Our patients presented with cone-rod dystrophy and intraretinal cystoid spaces. Review of the literature shows that the ocular phenotype can be very variable in patients with Heimler syndrome.


Subject(s)
ATPases Associated with Diverse Cellular Activities/genetics , Amelogenesis Imperfecta/genetics , Cone-Rod Dystrophies/genetics , Hearing Loss, Sensorineural/genetics , Macular Edema/genetics , Membrane Proteins/genetics , Mutation , Nails, Malformed/genetics , Amelogenesis Imperfecta/diagnostic imaging , Amelogenesis Imperfecta/physiopathology , Child , Cone-Rod Dystrophies/diagnostic imaging , Cone-Rod Dystrophies/physiopathology , Electroretinography , Female , Follow-Up Studies , Hearing Loss, Sensorineural/diagnostic imaging , Hearing Loss, Sensorineural/physiopathology , Humans , Macular Edema/diagnostic imaging , Macular Edema/physiopathology , Male , Nails, Malformed/diagnostic imaging , Nails, Malformed/physiopathology , Pedigree , Retina/physiopathology , Retrospective Studies , Siblings , Slit Lamp Microscopy , Tomography, Optical Coherence , Tonometry, Ocular , Visual Acuity/physiology
18.
Clin Epigenetics ; 13(1): 119, 2021 05 26.
Article in English | MEDLINE | ID: mdl-34039421

ABSTRACT

BACKGROUND: ZNF445, as well as ZFP57, is involved in the postfertilization methylation maintenance of multiple imprinting-associated differentially methylated regions (iDMRs). Thus, ZNF445 pathogenic variants are predicted to cause multilocus imprinting disturbances (MLIDs), as do ZFP57 pathogenic variants. In particular, the MEG3/DLK1:IG-DMR would be affected, because the postzygotic methylation imprint of the MEG3/DLK1:IG-DMR is maintained primarily by ZNF445, whereas that of most iDMRs is preserved by both ZFP57 and ZNF445 or primarily by ZFP57. RESULTS: We searched for a ZNF445 variant(s) in six patients with various imprinting disorders (IDs) caused by epimutations and MLIDs revealed by pyrosequencing for nine iDMRs, without a selection for the original IDs. Re-analysis of the previously obtained whole exome sequencing data identified a homozygous ZNF445 variant (NM_181489.6:c.2803C>T:p.(Gln935*)) producing a truncated protein missing two of 14 zinc finger domains in a patient with Temple syndrome and MLID. In this patient, array-based genomewide methylation analysis revealed severe hypomethylation of most CpGs at the MEG3:TSS-DMR, moderate hypomethylation of roughly two-thirds of CpGs at the H19/IGF2:IG-DMR, and mild-to-moderate hypomethylation of a few CpGs at the DIRAS3:TSS-DMR, MEST:alt-TSS-DMR, IGF2:Ex9-DMR, IGF2:alt-TSS, and GNAS-AS1:TSS-DMR. Furthermore, bisulfite sequencing analysis for the MEG3/DLK1:IG-DMR delineated a markedly hypomethylated segment (CG-A). The heterozygous parents were clinically normal and had virtually no aberrant methylation pattern. CONCLUSIONS: We identified a ZNF445 pathogenic variant for the first time. Since ZNF445 binds to the MEG3/DLK1:IG-DMR and other iDMRs affected in this patient, the development of Temple syndrome and MLID would primarily be explained by the ZNF445 variant. Furthermore, CG-A may be the target site for ZNF445 within the MEG3/DLK1:IG-DMR.


Subject(s)
Epigenesis, Genetic/genetics , Genomic Imprinting/genetics , Hallux/abnormalities , Intellectual Disability/genetics , Nails, Malformed/genetics , Repressor Proteins/genetics , Thumb/abnormalities , Zinc Fingers/genetics , Child, Preschool , Female , Humans , Multilocus Sequence Typing
19.
Mol Med Rep ; 24(1)2021 Jul.
Article in English | MEDLINE | ID: mdl-33955509

ABSTRACT

Short stature, onychodysplasia, facial dysmorphism and hypotrichosis (SOFT) syndrome is a rare autosomal recessive disease caused by POC1 centriolar protein A (POC1A) pathogenic variants. However, knowledge of genotypic and phenotypic features of SOFT syndrome remain limited as few families have been examined; therefore, the clinical identification of SOFT syndrome remains a challenge. The aim of the present case report was to investigate the genetic cause of this syndrome in a patient with a short stature, unusual facial appearance, skeletal dysplasia and sparse body hair. Giemsa banding and exome sequencing were performed to investigate the genetic background of the family. Spiral computed tomography and magnetic resonance imaging were used for investigating further phenotypic features of the patient. Exome sequencing identified that POC1A had two compound heterozygous variants, namely c.850_851insG and c.593_605delGTGGGACGTGCAT, which, to the best of our knowledge, have not been reported elsewhere. Novel phenotypes were also identified as follows: i) Metaphyseal dysplasia was alleviated (and/or even disappeared) with age; ii) the density of the femoral neck was uneven and the hyperintensity signal of the metaphysis was stripe­like. Thus, the present case report expands the knowledge regarding phenotypic and genotypic features of SOFT syndrome.


Subject(s)
Abnormalities, Multiple/genetics , Cell Cycle Proteins/genetics , Craniofacial Abnormalities/genetics , Cytoskeletal Proteins/genetics , Dwarfism/genetics , Hair/abnormalities , Muscular Atrophy/genetics , Nails, Malformed/genetics , Osteochondrodysplasias/genetics , Abnormalities, Multiple/diagnostic imaging , Child , Craniofacial Abnormalities/diagnostic imaging , Female , Humans , Muscular Atrophy/diagnostic imaging , Nails, Malformed/congenital , Osteochondrodysplasias/diagnostic imaging , Phenotype , Exome Sequencing
20.
Genes (Basel) ; 12(5)2021 04 26.
Article in English | MEDLINE | ID: mdl-33926089

ABSTRACT

This study aimed to identify the molecular genetic etiology of an 8-year-old boy with amelogenesis imperfecta in permanent dentition. Bilateral cochlear implants were placed due to sensorineural hearing loss, and there was no other family member with a similar phenotype. Peripheral blood samples were collected with the understanding and written consent of the participating family members. A constitutional chromosome study was performed for the proband. Genomic DNA was isolated, and whole exome sequencing was performed. A series of bioinformatic analyses were performed with the obtained paired-end sequencing reads, and the variants were filtered and annotated with dbSNP147. There was no abnormality in the constitutional chromosome study. Whole exome sequencing analysis with trio samples identified a homozygous mutation (c.506T>C, p. (Leu169Pro)) in the PEX26 gene. We verified "temperature sensitivity (ts)" of patient-derived Pex26-L169P by expression in pex26 CHO mutant ZP167 cells to determine the effect of the L169P mutation on Pex26 function. The L169P mutation causes a mild ts-cellular phenotype representing the decreased peroxisomal import of catalase. This study supports the finding that the recessive mutations in PEX26 are associated with Heimler syndrome and demonstrates the importance of an early and correct diagnosis.


Subject(s)
Amelogenesis Imperfecta/genetics , Hearing Loss, Sensorineural/genetics , Membrane Proteins/genetics , Nails, Malformed/genetics , Amelogenesis Imperfecta/pathology , Animals , CHO Cells , Child , Cricetinae , Cricetulus , Hearing Loss, Sensorineural/pathology , Homozygote , Humans , Male , Membrane Proteins/metabolism , Mutation , Nails, Malformed/pathology , Phenotype , Protein Transport
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